Publications | SPPIN - CNRS UMR 8003 https://www.sppin.fr Saint-Pères PARIS Institute for the Neuroscience Fri, 04 Sep 2026 12:11:29 +0000 en-US hourly 1 Smart coverslips: Turning a passive piece of glass into an active optical element https://www.sppin.fr/2026/09/04/biophysical-journal-accept-our-work-on-smart-coverslips/ Fri, 04 Sep 2026 10:24:45 +0000 https://www.sppin.fr/?p=4104 Our work on “smart coverslips” has been accepted in the BIOPHYSICAL JOURNAL. Great thanks and congratulations to Hodaya Klimovsky, Martin Oheim and Adi Salomon for another nice collaborative work that none of us could have done alone. Available already on arXiv : https://doi.org/10.48550/arXiv.2605.01472

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Our work on “smart coverslips” has been accepted in the BIOPHYSICAL JOURNAL. Great thanks and congratulations to Hodaya Klimovsky, Martin Oheim and Adi Salomon for another nice collaborative work that none of us could have done alone. Available already on arXiv : https://doi.org/10.48550/arXiv.2605.01472

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SPPIN sheds light on how the cerebellum coordinates the precision of each step https://www.sppin.fr/2026/08/24/sppin-sheds-light-on-how-the-cerebellum-coordinates-the-precision-of-each-step/ Mon, 24 Aug 2026 14:42:19 +0000 https://www.sppin.fr/?p=4086 Walking on uneven terrain requires constant adjustment of movement. In a study published in Nature Communications, SPPIN scientists from team 8 in collaboration with ENS show that the activity of certain neurons in the cerebellum synchronizes with the transitions between the support and swing phases of the mouse’s limbs during a complex locomotor task. This […]

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Walking on uneven terrain requires constant adjustment of movement. In a study published in Nature Communications, SPPIN scientists from team 8 in collaboration with ENS show that the activity of certain neurons in the cerebellum synchronizes with the transitions between the support and swing phases of the mouse’s limbs during a complex locomotor task. This research reveals a new neural mechanism involved in controlling movement precision and sheds light on motor coordination disorders.

Andrianarivelo, A., Stein, H., Gabillet, J. et al. Cerebellar activity is triggered by reach endpoint during learning of a complex locomotor task. Nat Commun (2026). https://doi.org/10.1038/s41467-026-74823-1 

Find this information on the CNRS Biology website

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Salla disease: SPPIN team reveals why a single mutation causes dysfunction in the sialin transporter https://www.sppin.fr/2026/05/11/salla-disease-sppin-team-reveals-why-a-single-mutation-causes-dysfunction-in-the-sialin-transporter/ Mon, 11 May 2026 12:57:16 +0000 https://www.sppin.fr/?p=4032 Salla disease is a rare genetic disorder with no current treatment, causing motor delay, and intellectual disability. Its cause lies in mutation of a transporter protein called sialin that is able to transport certain sugars from the interior of the cell organelles called lysosomes to their exterior. One of the most common mutations responsible for […]

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Salla disease is a rare genetic disorder with no current treatment, causing motor delay, and intellectual disability. Its cause lies in mutation of a transporter protein called sialin that is able to transport certain sugars from the interior of the cell organelles called lysosomes to their exterior. One of the most common mutations responsible for the disease is R39C, where one amino acid is swapped for another. This slight change leads to an interruption of the correct functioning of the transporter though how it does this has remained unknown so far. 

In a new study recently released as a preprint, the Membrane Dynamics team at SPPIN, in collaboration with Dassault Systèmes BIOVIA, proposes a mechanistic answer to this question. 

Sialin works as a rocker-switch, opening alternately toward the lysosome and the cytosol. Combining Molecular Dynamics simulations, evolutionary analysis and mutagenesis, the authors identified two key structural features: an interaction triplet (R39, E194, E262) acting as a modulator, and an ionic lock (K197–D350) holding the protein open toward the lysosome. In healthy sialin, the triplet periodically weakens the lock, allowing the switch to flip. In the R39C mutation, the triplet is no longer present leaving the lock permanently engaged and the sugars that would be transported under normal conditions trapped inside lysosomes. 

Beyond fundamental understanding of how the transporter works in healthy individuals, this work is the first to provide a molecular level understanding of how Salla disease is caused. The research was supported by the Salla Treatment And Disease foundation, the Dassault Systèmes foundation and the Vaincre les maladies lysosomales foundation.

Reference: https://doi.org/10.64898/2026.04.20.719580 

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New research links Subcellular transport & Local Protein Synthesis in Neurons to Presynaptic Plasticity & Memory https://www.sppin.fr/2026/01/22/new-research-links-subcellular-transport-local-protein-synthesis-in-neurons-to-presynaptic-plasticity-memory/ Thu, 22 Jan 2026 15:12:20 +0000 https://www.sppin.fr/?p=3945 Nicolas Panayotis (head of SPPIN Team7) has published a new paper in Science Signaling The new study reveals that subcellular localization of Importin β1 plays a crucial role in memory by supporting local translation at neuronal synapses. While Importin β1 is best known for transporting molecules into the nucleus, this work shows it is also […]

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Nicolas Panayotis (head of SPPIN Team7) has published a new paper in Science Signaling

The new study 1 reveals that subcellular localization of Importin β1 plays a crucial role in memory by supporting local translation at neuronal synapses. While Importin β1 is best known for transporting molecules into the nucleus, this work shows it is also essential at CNS presynaptic terminals, far from the cell body.

Using a mouse model in which Importin β1 could no longer properly localize to axons, they found clear impairments in hippocampus-dependent spatial and contextual memory. These deficits were traced to specific synapses in the hippocampus, where a presynaptic form of long-term plasticity (LTP) was disrupted.

At the molecular level, loss of axonal Importin β1 led to changes in synaptic protein composition and reduced local translation of key presynaptic components. As a result, synapses had fewer neurotransmitter vesicles ready for release, weakening communication between neurons.

These findings highlight the importance of local protein synthesis in maintaining synaptic function and memory, and identify Importin β1 as a key player in this process. The study opens new avenues for understanding how neurons regulate communication across long distances in the brain.

Graphical Abstract: Mechanisms linking the depletion of axonal importin β1 to impaired spatial memory via presynaptic dysfunction. The reduction in spatial and contextual memory in importin β1 Δ3’UTR mice results in impaired presynaptic plasticity of mossy fibres in the hippocampus (shown in blue on the left) and a reduction in the pool of synaptic vesicles (SVs) ready for release (Readily Releasable Pool, RRP). The results of the study show that these synaptic dysfunctions are due to a reduction in local synaptic protein synthesis (yellow bubbles/S) in the (presynaptic) mossy fiber boutton and an alteration in the synaptic phospho-proteomeand translatome. Thus, importin β1 appears to be a regulator of local protein synthesis of axonal mRNAs in the hippocampus. © Nicolas Panayotis & Philip Freund

P.A Freund/N. Panayotis. et al.Science Signaling, 2026 (10.1126/scisignal.ady2026)

  1. Thisresearch is the result of long-standing collaborative efforts from the Fainzilber lab (Weizmann Institute of Science, Rehovot, Israel) where Nicolas worked before joining the SPPIN as a group leader in 2023, the Kreutz Lab (Leibniz Institute for Neurobiology, Magdeburg, Germany), the Burlingame lab (UCSF), and the Kawaguchi team (UCLA) in the US. ↩︎

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New SPPIN paper in Nature Neuroscience: Population coding in Purkinje cells drives one-shot motor learning. https://www.sppin.fr/2025/12/08/new-sppin-paper-in-nature-neuroscience-population-coding-in-purkinje-cells-drives-one-shot-motor-learning/ Mon, 08 Dec 2025 11:51:58 +0000 https://www.sppin.fr/?p=3923 The Stell team has published a new paper in Nature Neuroscience : Rapid motor skill adjustment is associated with population-level modulation of cerebellar error signals. Nguyen V, Gros C, Stell BM : Nat Neurosci, 2025 This paper set out to answer a fundamental question in motor learning: How do our brains adapt and learn new […]

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The Stell team has published a new paper in Nature Neuroscience : Rapid motor skill adjustment is associated with population-level modulation of cerebellar error signals. Nguyen V, Gros C, Stell BM : Nat Neurosci, 2025

This paper set out to answer a fundamental question in motor learning: How do our brains adapt and learn new movements so quickly? We trained mice to use a joystick to retrieve rewards. To test their adaptation, we imposed a sudden perturbation (a 2x gain; lower panel in the video) that they needed to overcome. Remarkably, much like humans adapting to force-field or visuomotor perturbations, the mice adjusted their movements in only a few pulls.

This speed poses a challenge for classic supervised learning models. Climbing fibers provide error signals to Purkinje cells, but these signals are traditionally viewed as binary: error vs no error. How can such a coarse signal drive rapid, precise behavioral adaptation?

By imaging complex spikes in populations of Purkinje cells during learning, we found the answer in the collective activity.. Bands of cells responded similarly, and together these groups transformed the binary error/no-error signal into something far richer, encoding both the magnitude and direction of the behavioral error.

Although the error from a single pull produces only minuscule LTD/LTP at individual synapses, the combined effect across the population is strong enough to influence the very next joystick movement.

If you prefer a visual walkthrough over reading the paper, Brandon Stell explains the full results and the story here: https://www.youtube.com/watch?v=rNQYOyjr6SI

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Congrats to Floriane and Francine for the cover of JCIM https://www.sppin.fr/2024/06/11/congrats-to-floriane-and-francine-for-the-cover-of-jcim/ Tue, 11 Jun 2024 13:23:55 +0000 https://www.sppin.fr/?p=3272 Congratulation to Floriane ESHAK and Francine ACHER (team 4) for the cover of Journal of Chemical Information and Modeling. Article : Epitope Identification of an mGlu5 Receptor Nanobody Using Physics-Based Molecular Modeling and Deep Learning Techniques. Eshak F, Pion L, Scholler P, Nevoltris D, Chames P, Rondard P, Pin JP, Acher FC, Goupil-Lamy A : […]

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Congratulation to Floriane ESHAK and Francine ACHER (team 4) for the cover of Journal of Chemical Information and Modeling.

Article :

Epitope Identification of an mGlu5 Receptor Nanobody Using Physics-Based Molecular Modeling and Deep Learning Techniques. Eshak F, Pion L, Scholler P, Nevoltris D, Chames P, Rondard P, Pin JP, Acher FC, Goupil-Lamy A : J Chem Inf Model, 2024

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Congrats to Océane, Cécile and Bruno for their article in Nature Cell Biology https://www.sppin.fr/2024/06/07/congrats-for-paper-in-nature-cell-biology/ Fri, 07 Jun 2024 07:38:00 +0000 https://www.sppin.fr/?p=3207 Congrats to Océane Guelle, Cécile Jouffret and Bruno Gasnier, our colleagues Isabelle McCort and Julien Dairou from the chemistry UMR8601 lab, and our collaborators at the University of Kiel and EMBL Hamburg for the Nature Cell Biology paper published online.

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Congrats to Océane Guelle, Cécile Jouffret and Bruno Gasnier, our colleagues Isabelle McCort and Julien Dairou from the chemistry UMR8601 lab, and our collaborators at the University of Kiel and EMBL Hamburg for the Nature Cell Biology paper published online.

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A Colour-Encoded Nanometric Ruler for Axial Super-Resolution Microscopies https://www.sppin.fr/2023/11/07/a-colour-encoded-nanometric-ruler-for-axial-super-resolution-microscopies/ Tue, 07 Nov 2023 14:51:27 +0000 https://www.sppin.fr/?p=2852 Recent progress has boosted the resolving power of optical microscopies to spatial dimensions well below the diffraction limit. Yet, axial super-resolution and axial single-molecule localisation typically require more complicated implementations than their lateral counterparts. Also, there is a lack of suitable calibration tools that would permit a facile metrology along the microscope’s optical axis. Axial […]

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Recent progress has boosted the resolving power of optical microscopies to spatial dimensions well below the diffraction limit. Yet, axial super-resolution and axial single-molecule localisation typically require more complicated implementations than their lateral counterparts. Also, there is a lack of suitable calibration tools that would permit a facile metrology along the microscope’s optical axis. Axial test samples are also needed for quantifying nanometric drift, or axial fluorophore mobility, or again for quantifying the sub-wavelength light confinement in near-field microscopies. In our work work, submitted to Opt Commun and now available as a preprint on arXiv, we propose a simple solution for axial metrology by translating an axial metrology challenge into a spectral imaging and mixing problem, by aid of a multi-layered single-excitation, dual-emission test slide, in which axial distance is colour-encoded. 

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A first step towards truly quantitative TIRF microsopy https://www.sppin.fr/2023/03/06/a-first-step-towards-truly-quantitative-tirf-microsopy/ Mon, 06 Mar 2023 12:20:30 +0000 https://www.sppin.fr/?p=2644 Total internal reflection and other near-field optical techniques excel in selectively imaging dynamic processes at or near the basal plasma membrane, e.g., single-receptor or single-vesicle dynamics. However, it has been difficult to quantify TIRF intensities and relate them to axial fluorophore distance. Now, in Klimovsk et al. researchers from SPPIN’s team1 and the Salomon’s Lab […]

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Total internal reflection and other near-field optical techniques excel in selectively imaging dynamic processes at or near the basal plasma membrane, e.g., single-receptor or single-vesicle dynamics. However, it has been difficult to quantify TIRF intensities and relate them to axial fluorophore distance. Now, in Klimovsk et al. researchers from SPPIN’s team1 and the Salomon’s Lab at Bar-Ilan University describe a simple optical technique for simultaneously characterising the refractive index, flurophore distance and field-homogeneity of evanescent-wave excited thin fluorophore films. Test samples were assembled by combining “nanosandwiches” of thin (<200 nm) spacer layer made from a bioimimetic polymer and thin dye layers. Using such test slides with different thickness, they could quantify the flurophore distance with <10 nm resolution. The technique is based on the detection in the far-field and the analysis of the fluorphore radiation pattern in the back-focal plane of a high-NA objective.

NANOSCALE project web site

Characterizing nanometric thin films with far-field light, Hodaya Klimovsky, Omer Shavit, Carine Julien, Ilya Olevsko, Mohamed Hamode, Yossi Abulafia, Hervé Suaudeau, Vincent Armand, Martin Oheim, Adi Salomon, Advanced Optical Materials, 2022.08.15.503956; doi: https://doi.org/10.1101/2022.08.15.503956

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Characterizing nanometric axial distance with far-field light https://www.sppin.fr/2022/10/21/characterizing-nanometric-axial-distance-with-far-field-light/ Fri, 21 Oct 2022 15:07:38 +0000 https://www.sppin.fr/?p=2548 A group of researchers around Adi Salomon (BINA Nanocenter, Ramat-Gan, Israel) and Martin Oheim (SPPIN) have developed a simple nanometric calibration tool for axial super-resolution imaging. In a pre-print available on biorXiv, they describe a simple, non-invasive, optical technique for simultaneously characterizing the refractive index, thickness, and homogeneity of nanometric transparent layers. In the case of the […]

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A group of researchers around Adi Salomon (BINA Nanocenter, Ramat-Gan, Israel) and Martin Oheim (SPPIN) have developed a simple nanometric calibration tool for axial super-resolution imaging. In a pre-print available on biorXiv, they describe a simple, non-invasive, optical technique for simultaneously characterizing the refractive index, thickness, and homogeneity of nanometric transparent layers. In the case of the calibration sample, these layers are made of the biomimetic polymer, My-133-MC, having a refractive index of 1.33, so as to approach the cytosol for biological applications. The technique is based on the detection in the far field and the analysis of supercritical angle fluorescence (SAF), i.e., near-field emission from molecular dipoles located very close to the dielectric interface. Applications to localising FM-dye labelled vesicles in cortical astrocytes are presented.

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